/* ----------------------------------------------------------------------- Copyright: 2010-2021, imec Vision Lab, University of Antwerp 2014-2021, CWI, Amsterdam Contact: astra@astra-toolbox.com Website: http://www.astra-toolbox.com/ This file is part of the ASTRA Toolbox. The ASTRA Toolbox is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. The ASTRA Toolbox is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with the ASTRA Toolbox. If not, see . ----------------------------------------------------------------------- */ #include "astra/ParallelVecProjectionGeometry3D.h" #include "astra/Utilities.h" #include using namespace std; namespace astra { //---------------------------------------------------------------------------------------- // Default constructor. CParallelVecProjectionGeometry3D::CParallelVecProjectionGeometry3D() : CProjectionGeometry3D() { m_pProjectionAngles = 0; } //---------------------------------------------------------------------------------------- // Constructor. CParallelVecProjectionGeometry3D::CParallelVecProjectionGeometry3D(int _iProjectionAngleCount, int _iDetectorRowCount, int _iDetectorColCount, const SPar3DProjection* _pProjectionAngles ) : CProjectionGeometry3D() { initialize(_iProjectionAngleCount, _iDetectorRowCount, _iDetectorColCount, _pProjectionAngles); } //---------------------------------------------------------------------------------------- // Destructor. CParallelVecProjectionGeometry3D::~CParallelVecProjectionGeometry3D() { delete[] m_pProjectionAngles; } //--------------------------------------------------------------------------------------- // Initialize - Config bool CParallelVecProjectionGeometry3D::initialize(const Config& _cfg) { ASTRA_ASSERT(_cfg.self); ConfigStackCheck CC("ParallelVecProjectionGeometry3D", this, _cfg); XMLNode node; // initialization of parent class if (!CProjectionGeometry3D::initialize(_cfg)) return false; // success m_bInitialized = _check(); return m_bInitialized; } bool CParallelVecProjectionGeometry3D::initializeAngles(const Config& _cfg) { ConfigStackCheck CC("ParallelVecProjectionGeometry3D", this, _cfg); // Required: Vectors XMLNode node = _cfg.self.getSingleNode("Vectors"); ASTRA_CONFIG_CHECK(node, "ParallelVecProjectionGeometry3D", "No Vectors tag specified."); vector data; try { data = node.getContentNumericalArrayDouble(); } catch (const StringUtil::bad_cast &e) { ASTRA_CONFIG_CHECK(false, "ParallelVecProjectionGeometry3D", "Vectors must be a numerical matrix."); } CC.markNodeParsed("Vectors"); ASTRA_CONFIG_CHECK(data.size() % 12 == 0, "ParallelVecProjectionGeometry3D", "Vectors doesn't consist of 12-tuples."); m_iProjectionAngleCount = data.size() / 12; m_pProjectionAngles = new SPar3DProjection[m_iProjectionAngleCount]; for (int i = 0; i < m_iProjectionAngleCount; ++i) { SPar3DProjection& p = m_pProjectionAngles[i]; p.fRayX = data[12*i + 0]; p.fRayY = data[12*i + 1]; p.fRayZ = data[12*i + 2]; p.fDetUX = data[12*i + 6]; p.fDetUY = data[12*i + 7]; p.fDetUZ = data[12*i + 8]; p.fDetVX = data[12*i + 9]; p.fDetVY = data[12*i + 10]; p.fDetVZ = data[12*i + 11]; // The backend code currently expects the corner of the detector, while // the matlab interface supplies the center p.fDetSX = data[12*i + 3] - 0.5f * m_iDetectorRowCount * p.fDetVX - 0.5f * m_iDetectorColCount * p.fDetUX; p.fDetSY = data[12*i + 4] - 0.5f * m_iDetectorRowCount * p.fDetVY - 0.5f * m_iDetectorColCount * p.fDetUY; p.fDetSZ = data[12*i + 5] - 0.5f * m_iDetectorRowCount * p.fDetVZ - 0.5f * m_iDetectorColCount * p.fDetUZ; } return true; } //---------------------------------------------------------------------------------------- // Initialization. bool CParallelVecProjectionGeometry3D::initialize(int _iProjectionAngleCount, int _iDetectorRowCount, int _iDetectorColCount, const SPar3DProjection* _pProjectionAngles) { m_iProjectionAngleCount = _iProjectionAngleCount; m_iDetectorRowCount = _iDetectorRowCount; m_iDetectorColCount = _iDetectorColCount; m_pProjectionAngles = new SPar3DProjection[m_iProjectionAngleCount]; for (int i = 0; i < m_iProjectionAngleCount; ++i) m_pProjectionAngles[i] = _pProjectionAngles[i]; // TODO: check? // success m_bInitialized = _check(); return m_bInitialized; } //---------------------------------------------------------------------------------------- // Clone CProjectionGeometry3D* CParallelVecProjectionGeometry3D::clone() const { CParallelVecProjectionGeometry3D* res = new CParallelVecProjectionGeometry3D(); res->m_bInitialized = m_bInitialized; res->m_iProjectionAngleCount = m_iProjectionAngleCount; res->m_iDetectorRowCount = m_iDetectorRowCount; res->m_iDetectorColCount = m_iDetectorColCount; res->m_iDetectorTotCount = m_iDetectorTotCount; res->m_fDetectorSpacingX = m_fDetectorSpacingX; res->m_fDetectorSpacingY = m_fDetectorSpacingY; res->m_pProjectionAngles = new SPar3DProjection[m_iProjectionAngleCount]; memcpy(res->m_pProjectionAngles, m_pProjectionAngles, sizeof(m_pProjectionAngles[0])*m_iProjectionAngleCount); return res; } //---------------------------------------------------------------------------------------- // is equal bool CParallelVecProjectionGeometry3D::isEqual(const CProjectionGeometry3D * _pGeom2) const { if (_pGeom2 == NULL) return false; // try to cast argument to CParallelProjectionGeometry3D const CParallelVecProjectionGeometry3D* pGeom2 = dynamic_cast(_pGeom2); if (pGeom2 == NULL) return false; // both objects must be initialized if (!m_bInitialized || !pGeom2->m_bInitialized) return false; // check all values if (m_iProjectionAngleCount != pGeom2->m_iProjectionAngleCount) return false; if (m_iDetectorRowCount != pGeom2->m_iDetectorRowCount) return false; if (m_iDetectorColCount != pGeom2->m_iDetectorColCount) return false; if (m_iDetectorTotCount != pGeom2->m_iDetectorTotCount) return false; //if (m_fDetectorSpacingX != pGeom2->m_fDetectorSpacingX) return false; //if (m_fDetectorSpacingY != pGeom2->m_fDetectorSpacingY) return false; for (int i = 0; i < m_iProjectionAngleCount; ++i) { if (memcmp(&m_pProjectionAngles[i], &pGeom2->m_pProjectionAngles[i], sizeof(m_pProjectionAngles[i])) != 0) return false; } return true; } //---------------------------------------------------------------------------------------- // is of type bool CParallelVecProjectionGeometry3D::isOfType(const std::string& _sType) const { return (_sType == "parallel3d_vec"); } //---------------------------------------------------------------------------------------- // Get the configuration object Config* CParallelVecProjectionGeometry3D::getConfiguration() const { Config* cfg = new Config(); cfg->initialize("ProjectionGeometry3D"); cfg->self.addAttribute("type", "parallel3d_vec"); cfg->self.addChildNode("DetectorRowCount", m_iDetectorRowCount); cfg->self.addChildNode("DetectorColCount", m_iDetectorColCount); std::string vectors = ""; for (int i = 0; i < m_iProjectionAngleCount; ++i) { SPar3DProjection& p = m_pProjectionAngles[i]; vectors += StringUtil::toString(p.fRayX) + ","; vectors += StringUtil::toString(p.fRayY) + ","; vectors += StringUtil::toString(p.fRayZ) + ","; vectors += StringUtil::toString(p.fDetSX + 0.5f*m_iDetectorRowCount*p.fDetVX + 0.5f*m_iDetectorColCount*p.fDetUX) + ","; vectors += StringUtil::toString(p.fDetSY + 0.5f*m_iDetectorRowCount*p.fDetVY + 0.5f*m_iDetectorColCount*p.fDetUY) + ","; vectors += StringUtil::toString(p.fDetSZ + 0.5f*m_iDetectorRowCount*p.fDetVZ + 0.5f*m_iDetectorColCount*p.fDetUZ) + ","; vectors += StringUtil::toString(p.fDetUX) + ","; vectors += StringUtil::toString(p.fDetUY) + ","; vectors += StringUtil::toString(p.fDetUZ) + ","; vectors += StringUtil::toString(p.fDetVX) + ","; vectors += StringUtil::toString(p.fDetVY) + ","; vectors += StringUtil::toString(p.fDetVZ); if (i < m_iProjectionAngleCount-1) vectors += ';'; } cfg->self.addChildNode("Vectors", vectors); return cfg; } //---------------------------------------------------------------------------------------- CVector3D CParallelVecProjectionGeometry3D::getProjectionDirection(int _iProjectionIndex, int _iDetectorIndex) const { const SPar3DProjection& p = m_pProjectionAngles[_iProjectionIndex]; return CVector3D(p.fRayX, p.fRayY, p.fRayZ); } void CParallelVecProjectionGeometry3D::projectPoint(double fX, double fY, double fZ, int iAngleIndex, double &fU, double &fV) const { ASTRA_ASSERT(iAngleIndex >= 0); ASTRA_ASSERT(iAngleIndex < m_iProjectionAngleCount); double fUX, fUY, fUZ, fUC; double fVX, fVY, fVZ, fVC; computeBP_UV_Coeffs(m_pProjectionAngles[iAngleIndex], fUX, fUY, fUZ, fUC, fVX, fVY, fVZ, fVC); // The -0.5f shifts from corner to center of detector pixels fU = (fUX*fX + fUY*fY + fUZ*fZ + fUC) - 0.5f; fV = (fVX*fX + fVY*fY + fVZ*fZ + fVC) - 0.5f; } //---------------------------------------------------------------------------------------- bool CParallelVecProjectionGeometry3D::_check() { // TODO return true; } } // end namespace astra